Sunday, December 18, 2011
David Reshef, Yakir Reshef, Hilary Finucane, Sharon Grossman, Gilean McVean, Peter Turnbaugh, Eric Lander, Michael Mitzenmacher, Pardis Sabeti
Identifying interesting relationships between pairs of variables in large data sets is increasingly important. Here, we present a measure of dependence for two-variable relationships: the maximal information coefficient (MIC). MIC captures a wide range of associations both functional and not, and for functional relationships provides a score that roughly equals the coefficient of determination (R2) of the data relative to the regression function. MIC belongs to a larger class of maximal information-based nonparametric exploration (MINE) statistics for identifying and classifying relationships. We apply MIC and MINE to data sets in global health, gene expression, major-league baseball, and the human gut microbiota and identify known and novel relationships.
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Science 16 December 2011:
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Detecting Novel Associations in Large Data Sets
David N. Reshef, Yakir A. Reshef, Hilary K. Finucane, Sharon R. Grossman, Gilean McVean, Peter J. Turnbaugh, Eric S. Lander, Michael Mitzenmacher, Pardis C. Sabeti
http://www.sciencemag.org/content/334/6062/1518.abstract